Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.02□□□□□ -0.17
NPIPB3Q92617 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.02□□□□□ -0.17
NPIPB3Q92617 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.02□□□□□ -0.17
NPIPB3Q92617 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.02□□□□□ -0.17
NPIPB3Q92617 AL157888.1-201ENST00000631930 593 ntBASIC14.02□□□□□ -0.17
NPIPB3Q92617 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NPIPB3Q92617 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPB3Q92617 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.02□□□□□ -0.17
NPIPB3Q92617 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPB3Q92617 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NPIPB3Q92617 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.02□□□□□ -0.17
NPIPB3Q92617 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 AC009949.1-201ENST00000623048 1830 ntBASIC14.01□□□□□ -0.17
NPIPB3Q92617 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 AC022211.2-201ENST00000585075 2527 ntBASIC14.01□□□□□ -0.17
NPIPB3Q92617 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 MMP23A-201ENST00000234610 1017 ntBASIC14.01□□□□□ -0.17
NPIPB3Q92617 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 TSPY15P-201ENST00000457163 923 ntBASIC14.01□□□□□ -0.17
NPIPB3Q92617 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 FAM87A-204ENST00000613235 858 ntBASIC14.01□□□□□ -0.17
NPIPB3Q92617 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPB3Q92617 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPB3Q92617 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NPIPB3Q92617 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14□□□□□ -0.17
NPIPB3Q92617 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NPIPB3Q92617 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14□□□□□ -0.17
NPIPB3Q92617 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NPIPB3Q92617 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPB3Q92617 AP000523.1-201ENST00000398242 1049 ntBASIC14□□□□□ -0.17
NPIPB3Q92617 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPB3Q92617 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14□□□□□ -0.17
NPIPB3Q92617 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14□□□□□ -0.17
NPIPB3Q92617 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 TMEM191A-211ENST00000637163 1067 ntBASIC14□□□□□ -0.17
NPIPB3Q92617 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14□□□□□ -0.17
NPIPB3Q92617 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPB3Q92617 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPB3Q92617 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB3Q92617 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPB3Q92617 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB3Q92617 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms