Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB40AQ8WXH6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40AQ8WXH6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RAB40AQ8WXH6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40AQ8WXH6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40AQ8WXH6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RAB40AQ8WXH6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB40AQ8WXH6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40AQ8WXH6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 ARMC10P1-201ENST00000313754 855 ntBASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 MIR149-201ENST00000384879 89 ntBASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 RNF152P1-201ENST00000397754 604 ntBASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 AC117947.1-201ENST00000427448 529 ntBASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 KRT18P35-201ENST00000510488 1269 ntBASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 AC140113.3-201ENST00000605663 199 ntBASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 AC139887.4-201ENST00000607877 719 ntBASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40AQ8WXH6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 CROCCP2-202ENST00000412962 2773 ntBASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
RAB40AQ8WXH6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms