Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB3IL1Q8TBN0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB3IL1Q8TBN0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB3IL1Q8TBN0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 AC104390.1-201ENST00000555663 520 ntBASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB3IL1Q8TBN0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 SLC25A1P4-201ENST00000567977 778 ntBASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 WWOX-216ENST00000569818 525 ntBASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 AC116407.2-201ENST00000613639 860 ntBASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IL1Q8TBN0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 AC008687.5-201ENST00000593746 558 ntBASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IL1Q8TBN0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms