Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 HOXB1-202ENST00000577092 1414 ntBASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 KRT18P23-201ENST00000435622 1283 ntBASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 AP003097.1-201ENST00000530657 1135 ntBASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 LINC01451-201ENST00000623792 534 ntBASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH3Q8TBE1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 AL596257.1-201ENST00000641463 2694 ntBASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 AC009949.1-201ENST00000623048 1830 ntBASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 B3GAT3P1-201ENST00000471720 806 ntBASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 MIR4674-201ENST00000582457 87 ntBASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 AC124016.1-201ENST00000609552 612 ntBASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.22■□□□□ 0.19
CNIH3Q8TBE1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 HLA-L-209ENST00000420110 1011 ntBASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 MIR6786-201ENST00000616843 113 ntBASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms