Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 RN7SL606P-201ENST00000472779 293 ntBASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 AP000867.3-201ENST00000524675 377 ntBASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCC2Q8TAQ2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCC2Q8TAQ2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCC2Q8TAQ2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms