Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 AC125437.2-201ENST00000625180 2167 ntBASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
SNIP1Q8TAD8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 OR6D1P-202ENST00000641007 5290 ntBASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 LINC01126-201ENST00000623515 1646 ntBASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.67■□□□□ 0.26
SNIP1Q8TAD8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 AL139400.1-201ENST00000366220 510 ntBASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 AC096633.1-201ENST00000422446 749 ntBASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 AC006504.4-201ENST00000592118 1568 ntBASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 PCDHAC2-203ENST00000615316 3011 ntBASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNIP1Q8TAD8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms