Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 RNF152P1-201ENST00000397754 604 ntBASIC18■□□□□ 0.47
CFAP61Q8NHU2 TSPY5P-201ENST00000426936 936 ntBASIC18■□□□□ 0.47
CFAP61Q8NHU2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 AC046158.3-201ENST00000624947 2558 ntBASIC18■□□□□ 0.47
CFAP61Q8NHU2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 AC009102.3-201ENST00000623118 1491 ntBASIC18■□□□□ 0.47
CFAP61Q8NHU2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CFAP61Q8NHU2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP61Q8NHU2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 FAM210CP-201ENST00000445714 574 ntBASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 AC092647.4-201ENST00000457211 535 ntBASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 AL359075.1-203ENST00000462729 1002 ntBASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 AC034232.1-201ENST00000506026 1064 ntBASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 MIR3917-201ENST00000580971 93 ntBASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.99■□□□□ 0.47
CFAP61Q8NHU2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 NKILA-202ENST00000614771 2598 ntBASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 MIR149-201ENST00000384879 89 ntBASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 AC009065.1-201ENST00000564055 1225 ntBASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP61Q8NHU2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CFAP61Q8NHU2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP61Q8NHU2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP61Q8NHU2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP61Q8NHU2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms