Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 DDX43P3-201ENST00000441064 443 ntBASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 AC012615.1-201ENST00000565797 1299 ntBASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LPCAT1Q8NF37 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.89■□□□□ 0.46
LPCAT1Q8NF37 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
LPCAT1Q8NF37 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 GNAS-203ENST00000306120 1878 ntBASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 AC010460.3-201ENST00000511359 1579 ntBASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 AC096633.1-201ENST00000422446 749 ntBASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 IGHV3-47-201ENST00000425060 335 ntBASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 AC099336.1-202ENST00000602961 463 ntBASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LPCAT1Q8NF37 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 AC007967.3-201ENST00000434308 558 ntBASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 AC096582.2-201ENST00000510860 516 ntBASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 MIR3652-201ENST00000579335 131 ntBASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPCAT1Q8NF37 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LPCAT1Q8NF37 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms