Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 AP002414.3-201ENST00000589352 1468 ntBASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 BICD1-207ENST00000551848 1962 ntBASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 MIR1233-2-201ENST00000408138 82 ntBASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 MIR1233-1-201ENST00000408722 82 ntBASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 BX842568.4-201ENST00000421222 227 ntBASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 RNA5SP415-201ENST00000517246 115 ntBASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 AC145285.3-201ENST00000564603 959 ntBASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 AC107918.4-202ENST00000641623 219 ntBASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCBTB1Q8NDN9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 AC135050.7-201ENST00000624508 2218 ntBASIC17■□□□□ 0.31
RCBTB1Q8NDN9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 MED15P5-201ENST00000423150 992 ntBASIC17■□□□□ 0.31
RCBTB1Q8NDN9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 AC034105.1-201ENST00000563488 319 ntBASIC17■□□□□ 0.31
RCBTB1Q8NDN9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 AC140113.2-201ENST00000604370 208 ntBASIC17■□□□□ 0.31
RCBTB1Q8NDN9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RCBTB1Q8NDN9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 AC096633.1-201ENST00000422446 749 ntBASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 AC105339.3-201ENST00000560043 636 ntBASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 AL356488.2-201ENST00000602755 427 ntBASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 Z83851.2-201ENST00000609564 659 ntBASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 AC027601.4-201ENST00000611259 610 ntBASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 AC135776.1-201ENST00000319817 2481 ntBASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 AC079776.2-201ENST00000641154 1609 ntBASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCBTB1Q8NDN9 PMPCAP1-201ENST00000508114 1576 ntBASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 SIRPAP1-201ENST00000448467 1770 ntBASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.98■□□□□ 0.31
RCBTB1Q8NDN9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms