Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KDM1BQ8NB78 LINC00896-202ENST00000609602 2128 ntBASIC18.1■□□□□ 0.49
KDM1BQ8NB78 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDM1BQ8NB78 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.1■□□□□ 0.49
KDM1BQ8NB78 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 MRPL3P1-201ENST00000400109 1033 ntBASIC18.09■□□□□ 0.49
KDM1BQ8NB78 KRT18P67-201ENST00000432816 1264 ntBASIC18.09■□□□□ 0.49
KDM1BQ8NB78 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 FAM197Y8-203ENST00000450145 560 ntBASIC18.09■□□□□ 0.49
KDM1BQ8NB78 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 AP001269.4-201ENST00000609611 512 ntBASIC18.09■□□□□ 0.49
KDM1BQ8NB78 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 TP73-AS1-207ENST00000624167 988 ntBASIC18.09■□□□□ 0.49
KDM1BQ8NB78 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.09■□□□□ 0.49
KDM1BQ8NB78 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.08■□□□□ 0.49
KDM1BQ8NB78 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 AF186996.4-201ENST00000467186 377 ntBASIC18.08■□□□□ 0.48
KDM1BQ8NB78 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 MTDHP3-201ENST00000594186 672 ntBASIC18.08■□□□□ 0.48
KDM1BQ8NB78 AL773604.1-201ENST00000617417 272 ntBASIC18.08■□□□□ 0.48
KDM1BQ8NB78 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KDM1BQ8NB78 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 GNAS-203ENST00000306120 1878 ntBASIC18.07■□□□□ 0.48
KDM1BQ8NB78 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 REXO1L9P-201ENST00000604264 2108 ntBASIC18.07■□□□□ 0.48
KDM1BQ8NB78 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 HLA-A-201ENST00000376802 1334 ntBASIC18.07■□□□□ 0.48
KDM1BQ8NB78 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KDM1BQ8NB78 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms