Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC4Q8N9L1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 HLA-J-201ENST00000462773 1622 ntBASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 AC005332.8-201ENST00000622750 2735 ntBASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 KRT18P31-201ENST00000506277 1292 ntBASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
ZIC4Q8N9L1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 AC002558.1-201ENST00000488906 803 ntBASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 PRELID1P1-202ENST00000567272 903 ntBASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 AC109462.3-201ENST00000573934 613 ntBASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 AL591684.3-201ENST00000605187 298 ntBASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 KRT8P10-201ENST00000450021 1447 ntBASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 PCDHB18P-201ENST00000524813 2368 ntBASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC4Q8N9L1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ZIC4Q8N9L1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.64■□□□□ 0.1
ZIC4Q8N9L1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZIC4Q8N9L1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms