Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 ECEL1P2-202ENST00000465689 757 ntBASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 NAPSB-206ENST00000562112 1266 ntBASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 AC116407.2-201ENST00000613639 860 ntBASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 AC010947.1-201ENST00000623454 693 ntBASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL1Q8N7R7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 TSPY15P-201ENST00000457163 923 ntBASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 AL512604.3-201ENST00000569583 964 ntBASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 AL157888.1-201ENST00000631930 593 ntBASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 AC084018.2-201ENST00000613093 2607 ntBASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCNYL1Q8N7R7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 HLA-J-201ENST00000462773 1622 ntBASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 FAM87A-204ENST00000613235 858 ntBASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 AP006294.2-201ENST00000641667 209 ntBASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.52■□□□□ 0.4
CCNYL1Q8N7R7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCNYL1Q8N7R7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCNYL1Q8N7R7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCNYL1Q8N7R7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.51■□□□□ 0.39
CCNYL1Q8N7R7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCNYL1Q8N7R7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms