Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 AC097374.2-201ENST00000618617 1306 ntBASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 AC020916.1-201ENST00000587762 1774 ntBASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH20Q8N6Y1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 AC011467.2-201ENST00000598425 242 ntBASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 KRT8P47-201ENST00000604727 1398 ntBASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 REXO1L9P-201ENST00000604264 2108 ntBASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH20Q8N6Y1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 AC004870.1-201ENST00000315132 882 ntBASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 AC096633.1-201ENST00000422446 749 ntBASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 MIR5100-201ENST00000579544 119 ntBASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 RN7SL510P-201ENST00000581311 263 ntBASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 AL591684.3-201ENST00000605187 298 ntBASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH20Q8N6Y1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH20Q8N6Y1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms