Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39CQ8N584 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39CQ8N584 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39CQ8N584 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39CQ8N584 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39CQ8N584 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TTC39CQ8N584 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TTC39CQ8N584 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39CQ8N584 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39CQ8N584 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39CQ8N584 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 AL591684.3-201ENST00000605187 298 ntBASIC18.83■□□□□ 0.6
TTC39CQ8N584 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.83■□□□□ 0.6
TTC39CQ8N584 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39CQ8N584 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39CQ8N584 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39CQ8N584 REXO1L11P-201ENST00000620964 1927 ntBASIC18.82■□□□□ 0.6
TTC39CQ8N584 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39CQ8N584 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39CQ8N584 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39CQ8N584 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39CQ8N584 NUS1P2-201ENST00000417358 873 ntBASIC18.82■□□□□ 0.6
TTC39CQ8N584 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 LINC01711-201ENST00000598340 967 ntBASIC18.82■□□□□ 0.6
TTC39CQ8N584 AC138894.3-201ENST00000603787 634 ntBASIC18.82■□□□□ 0.6
TTC39CQ8N584 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39CQ8N584 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39CQ8N584 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC39CQ8N584 AC068880.1-201ENST00000507289 2297 ntBASIC18.82■□□□□ 0.6
TTC39CQ8N584 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.82■□□□□ 0.6
TTC39CQ8N584 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 TSPY19P-201ENST00000418461 509 ntBASIC18.81■□□□□ 0.6
TTC39CQ8N584 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 TSPY18P-201ENST00000441642 509 ntBASIC18.81■□□□□ 0.6
TTC39CQ8N584 FOSL1P1-201ENST00000511041 816 ntBASIC18.81■□□□□ 0.6
TTC39CQ8N584 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 AC019129.2-201ENST00000609837 1235 ntBASIC18.81■□□□□ 0.6
TTC39CQ8N584 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.81■□□□□ 0.6
TTC39CQ8N584 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC39CQ8N584 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TTC39CQ8N584 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC39CQ8N584 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms