Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PHTF2Q8N3S3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PHTF2Q8N3S3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.33■□□□□ 0.53
PHTF2Q8N3S3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PHTF2Q8N3S3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHTF2Q8N3S3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.33■□□□□ 0.53
PHTF2Q8N3S3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 AF228730.7-201ENST00000641842 219 ntBASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHTF2Q8N3S3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 AP005117.1-201ENST00000584346 1413 ntBASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.32■□□□□ 0.52
PHTF2Q8N3S3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 MIR574-201ENST00000385209 96 ntBASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 ABCD1P5-201ENST00000445663 754 ntBASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 SCARNA2-201ENST00000458748 420 ntBASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 FAM215A-202ENST00000632077 792 ntBASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHTF2Q8N3S3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms