Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM43AQ8N2R8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM43AQ8N2R8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FAM43AQ8N2R8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM43AQ8N2R8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FAM43AQ8N2R8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FAM43AQ8N2R8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
FAM43AQ8N2R8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 AC139530.3-201ENST00000620344 690 ntBASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
FAM43AQ8N2R8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 AC233702.3-201ENST00000578656 1387 ntBASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 KRT8P3-201ENST00000519669 1449 ntBASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 AC090616.6-201ENST00000582640 721 ntBASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 AC099336.1-202ENST00000602961 463 ntBASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 AL390719.2-201ENST00000606993 987 ntBASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 IGHV3-41-201ENST00000613121 348 ntBASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 AC011676.5-201ENST00000624864 2660 ntBASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM43AQ8N2R8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 AL590627.1-203ENST00000421194 1026 ntBASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM43AQ8N2R8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM43AQ8N2R8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms