Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 REXO1L11P-201ENST00000620964 1927 ntBASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 MIR4651-201ENST00000582622 73 ntBASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 MIR4785-201ENST00000585005 73 ntBASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 AC080080.1-201ENST00000625121 2420 ntBASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 AC009949.1-201ENST00000623048 1830 ntBASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 AC099343.3-201ENST00000605834 2503 ntBASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01561Q8N1V8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01561Q8N1V8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms