Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 MIR1238-201ENST00000408483 83 ntBASIC16.06■□□□□ 0.16
SHFQ7M4L6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 EGLN1P1-201ENST00000531623 762 ntBASIC16.06■□□□□ 0.16
SHFQ7M4L6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 AL512604.3-201ENST00000569583 964 ntBASIC16.06■□□□□ 0.16
SHFQ7M4L6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 AC008687.5-201ENST00000593746 558 ntBASIC16.06■□□□□ 0.16
SHFQ7M4L6 AP006294.2-201ENST00000641667 209 ntBASIC16.06■□□□□ 0.16
SHFQ7M4L6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SHFQ7M4L6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHFQ7M4L6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 AL390955.1-201ENST00000428694 934 ntBASIC16.05■□□□□ 0.16
SHFQ7M4L6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 AC010240.3-201ENST00000607688 395 ntBASIC16.05■□□□□ 0.16
SHFQ7M4L6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.05■□□□□ 0.16
SHFQ7M4L6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.05■□□□□ 0.16
SHFQ7M4L6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHFQ7M4L6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SHFQ7M4L6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.04■□□□□ 0.16
SHFQ7M4L6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SHFQ7M4L6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SHFQ7M4L6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.04■□□□□ 0.16
SHFQ7M4L6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 DUTP2-201ENST00000519164 463 ntBASIC16.04■□□□□ 0.16
SHFQ7M4L6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.04■□□□□ 0.16
SHFQ7M4L6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.04■□□□□ 0.16
SHFQ7M4L6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 AL121761.2-201ENST00000598007 1648 ntBASIC16.04■□□□□ 0.16
SHFQ7M4L6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.04■□□□□ 0.16
SHFQ7M4L6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHFQ7M4L6 AL118508.1-201ENST00000613502 2345 ntBASIC16.03■□□□□ 0.16
SHFQ7M4L6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHFQ7M4L6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.03■□□□□ 0.16
SHFQ7M4L6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms