Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 AL020989.1-201ENST00000422979 469 ntBASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 AC092183.1-201ENST00000469884 875 ntBASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 AC092910.1-201ENST00000482027 1129 ntBASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 TERC-201ENST00000602385 541 ntBASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 PMS2P7-201ENST00000506558 1336 ntBASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 ZNF259P1-201ENST00000407656 1365 ntBASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 FLJ13224-201ENST00000313737 1514 ntBASIC18.9■□□□□ 0.62
DCLRE1AQ6PJP8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DCLRE1AQ6PJP8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DCLRE1AQ6PJP8 AC004817.3-201ENST00000602957 2129 ntBASIC18.89■□□□□ 0.62
DCLRE1AQ6PJP8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
DCLRE1AQ6PJP8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DCLRE1AQ6PJP8 AC132938.5-201ENST00000624980 1813 ntBASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 AC019129.2-201ENST00000609837 1235 ntBASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 KRT18P55-202ENST00000578578 1546 ntBASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.89■□□□□ 0.61
DCLRE1AQ6PJP8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 AC145285.3-201ENST00000564603 959 ntBASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 AC109462.3-201ENST00000573934 613 ntBASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DCLRE1AQ6PJP8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 MIR940-201ENST00000401276 94 ntBASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 AC098831.1-202ENST00000438821 336 ntBASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.87■□□□□ 0.61
DCLRE1AQ6PJP8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms