Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 AC079781.3-201ENST00000449110 356 ntBASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 MTDHP3-201ENST00000594186 672 ntBASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRAT1Q6PJG6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 FGFR3P6-201ENST00000457012 610 ntBASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 SCARNA2-201ENST00000458748 420 ntBASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 AL160237.2-201ENST00000556165 472 ntBASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 AC104692.2-201ENST00000603054 253 ntBASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 PMPCAP1-201ENST00000508114 1576 ntBASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 AL049757.1-201ENST00000616842 1596 ntBASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 SIRPAP1-201ENST00000448467 1770 ntBASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRAT1Q6PJG6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 AL353593.2-201ENST00000602529 1483 ntBASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 AC026396.1-201ENST00000419388 421 ntBASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 AC002558.1-201ENST00000488906 803 ntBASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.72■□□□□ 0.43
BRAT1Q6PJG6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
BRAT1Q6PJG6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.71■□□□□ 0.43
BRAT1Q6PJG6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
BRAT1Q6PJG6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.71■□□□□ 0.43
BRAT1Q6PJG6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAT1Q6PJG6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAT1Q6PJG6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAT1Q6PJG6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms