Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF17Q5VTA0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF17Q5VTA0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF17Q5VTA0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF17Q5VTA0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.91■□□□□ 0.3
PRAMEF17Q5VTA0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF17Q5VTA0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF17Q5VTA0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF17Q5VTA0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 AL590627.1-203ENST00000421194 1026 ntBASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 AF186996.4-201ENST00000467186 377 ntBASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 NEFHP1-201ENST00000412845 2629 ntBASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 AC090164.3-201ENST00000610780 2143 ntBASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF17Q5VTA0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
PRAMEF17Q5VTA0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 AP000997.3-201ENST00000623333 2250 ntBASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 RBM17P3-201ENST00000417687 1192 ntBASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 AC018712.1-201ENST00000455767 687 ntBASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 DUTP2-201ENST00000519164 463 ntBASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF17Q5VTA0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 FAM220CP-201ENST00000395253 831 ntBASIC16.88■□□□□ 0.29
PRAMEF17Q5VTA0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms