Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 AL391807.1-203ENST00000604392 2365 ntBASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 AC112698.1-201ENST00000510299 916 ntBASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 AL138966.2-201ENST00000621997 464 ntBASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRIF1Q5T3J3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 RASA4DP-201ENST00000460726 1199 ntBASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 AL136038.4-201ENST00000603606 1261 ntBASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 AC004263.2-201ENST00000617183 678 ntBASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 AC116353.5-201ENST00000638148 1699 ntBASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIF1Q5T3J3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRIF1Q5T3J3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRIF1Q5T3J3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 LINC01311-201ENST00000565162 1445 ntBASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 LINC01568-207ENST00000641790 1380 ntBASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIF1Q5T3J3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms