Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC097374.2-201ENST00000618617 1306 ntBASIC17.67■□□□□ 0.42
LDLRAP1Q5SW96 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDLRAP1Q5SW96 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDLRAP1Q5SW96 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.67■□□□□ 0.42
LDLRAP1Q5SW96 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 AC100803.2-201ENST00000562459 1963 ntBASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 AC125634.1-201ENST00000438758 1403 ntBASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 MINOS1P3-201ENST00000457048 203 ntBASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 AC091607.1-201ENST00000490318 1060 ntBASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 MIR3652-201ENST00000579335 131 ntBASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 AC005336.2-201ENST00000593183 939 ntBASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDLRAP1Q5SW96 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 AC096633.1-201ENST00000422446 749 ntBASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 IGHV3-47-201ENST00000425060 335 ntBASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 AL138831.2-201ENST00000606564 490 ntBASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 NSUN5P1-202ENST00000421140 1535 ntBASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 NSUN5P2-203ENST00000457352 1529 ntBASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDLRAP1Q5SW96 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LDLRAP1Q5SW96 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDLRAP1Q5SW96 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms