Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SGO1Q5FBB7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.35
SGO1Q5FBB7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SGO1Q5FBB7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SGO1Q5FBB7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SGO1Q5FBB7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 FAM8A6P-201ENST00000407496 1135 ntBASIC17.26■□□□□ 0.35
SGO1Q5FBB7 KRT18P48-201ENST00000434763 852 ntBASIC17.26■□□□□ 0.35
SGO1Q5FBB7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 AC113404.2-201ENST00000507884 177 ntBASIC17.26■□□□□ 0.35
SGO1Q5FBB7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.26■□□□□ 0.35
SGO1Q5FBB7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 AC073508.3-201ENST00000619697 1419 ntBASIC17.25■□□□□ 0.35
SGO1Q5FBB7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 STARP1-201ENST00000397973 869 ntBASIC17.25■□□□□ 0.35
SGO1Q5FBB7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 AL359075.1-203ENST00000462729 1002 ntBASIC17.25■□□□□ 0.35
SGO1Q5FBB7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 AL645608.8-201ENST00000606034 2086 ntBASIC17.25■□□□□ 0.35
SGO1Q5FBB7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGO1Q5FBB7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 ZNF444P1-201ENST00000559497 298 ntBASIC17.24■□□□□ 0.35
SGO1Q5FBB7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms