Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 AC005104.2-201ENST00000427818 678 ntBASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 AD001527.2-201ENST00000622994 785 ntBASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 AP000867.4-201ENST00000641616 219 ntBASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 EMBP1-201ENST00000458200 901 ntBASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 LINC01451-201ENST00000623792 534 ntBASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 NOC2LP1-202ENST00000452600 2235 ntBASIC20.72■□□□□ 0.91
CCDC178Q5BJE1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 AKR1C7P-201ENST00000305623 895 ntBASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 MYCLP1-201ENST00000372451 1075 ntBASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 IGHV3-52-201ENST00000519770 353 ntBASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 AL355877.3-201ENST00000622820 899 ntBASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC178Q5BJE1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC178Q5BJE1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 AL353593.2-201ENST00000602529 1483 ntBASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms