Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 KRT17P2-201ENST00000300992 1314 ntBASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 FAM87A-204ENST00000613235 858 ntBASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 KRT89P-201ENST00000620027 1478 ntBASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 HMGA1P5-201ENST00000412453 271 ntBASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 AC024563.2-201ENST00000603282 481 ntBASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RUNDC3AQ59EK9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 ECEL1P2-202ENST00000465689 757 ntBASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 NAPSB-206ENST00000562112 1266 ntBASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 AL118508.1-201ENST00000613502 2345 ntBASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms