Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN20Q4JDL3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.64■□□□□ 0.58
PTPN20Q4JDL3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTPN20Q4JDL3 NSUN5P1-202ENST00000421140 1535 ntBASIC18.64■□□□□ 0.58
PTPN20Q4JDL3 NSUN5P2-203ENST00000457352 1529 ntBASIC18.64■□□□□ 0.58
PTPN20Q4JDL3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PTPN20Q4JDL3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PTPN20Q4JDL3 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 BNIP3P18-201ENST00000593976 575 ntBASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN20Q4JDL3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 AP000867.3-201ENST00000524675 377 ntBASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 AC092329.2-201ENST00000598402 547 ntBASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 AC019129.2-201ENST00000609837 1235 ntBASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 AC139713.2-201ENST00000641328 2723 ntBASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN20Q4JDL3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 AC074051.2-201ENST00000565115 352 ntBASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 AC011467.2-201ENST00000598425 242 ntBASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN20Q4JDL3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms