Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCSMST1Q4G0I0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.21■□□□□ 0.34
CCSMST1Q4G0I0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 PP12613-201ENST00000424958 2230 ntBASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 NUS1P2-201ENST00000417358 873 ntBASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 FOSL1P1-201ENST00000511041 816 ntBASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 AC009533.2-201ENST00000543664 586 ntBASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 MIR3652-201ENST00000579335 131 ntBASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 AC011467.2-201ENST00000598425 242 ntBASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.2■□□□□ 0.34
CCSMST1Q4G0I0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 KRT18P56-201ENST00000507275 550 ntBASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 CLEC4GP1-201ENST00000596555 870 ntBASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCSMST1Q4G0I0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCSMST1Q4G0I0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCSMST1Q4G0I0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCSMST1Q4G0I0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCSMST1Q4G0I0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.18■□□□□ 0.34
CCSMST1Q4G0I0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCSMST1Q4G0I0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCSMST1Q4G0I0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCSMST1Q4G0I0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCSMST1Q4G0I0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCSMST1Q4G0I0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms