Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 RHOQP3-201ENST00000437982 621 ntBASIC17.12■□□□□ 0.33
HLA-BQ31612 IGHV3-52-201ENST00000519770 353 ntBASIC17.12■□□□□ 0.33
HLA-BQ31612 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HLA-BQ31612 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-BQ31612 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.12■□□□□ 0.33
HLA-BQ31612 AC027612.4-201ENST00000605371 583 ntBASIC17.12■□□□□ 0.33
HLA-BQ31612 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-BQ31612 AC116407.2-201ENST00000613639 860 ntBASIC17.12■□□□□ 0.33
HLA-BQ31612 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HLA-BQ31612 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-BQ31612 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-BQ31612 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-BQ31612 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-BQ31612 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-BQ31612 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HLA-BQ31612 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-BQ31612 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
HLA-BQ31612 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-BQ31612 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 AL096828.2-201ENST00000567259 1965 ntBASIC17.11■□□□□ 0.33
HLA-BQ31612 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HLA-BQ31612 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-BQ31612 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-BQ31612 FAM58CP-201ENST00000435741 640 ntBASIC17.11■□□□□ 0.33
HLA-BQ31612 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-BQ31612 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 ACTG1P14-201ENST00000446382 1122 ntBASIC17.11■□□□□ 0.33
HLA-BQ31612 AC074386.1-202ENST00000463561 864 ntBASIC17.11■□□□□ 0.33
HLA-BQ31612 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HLA-BQ31612 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.11■□□□□ 0.33
HLA-BQ31612 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-BQ31612 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-BQ31612 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-BQ31612 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-BQ31612 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 AC025580.3-201ENST00000617932 1424 ntBASIC17.11■□□□□ 0.33
HLA-BQ31612 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-BQ31612 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-BQ31612 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-BQ31612 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.1■□□□□ 0.33
HLA-BQ31612 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-BQ31612 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.1■□□□□ 0.33
HLA-BQ31612 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-BQ31612 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
HLA-BQ31612 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HLA-BQ31612 OR7E47P-204ENST00000575924 449 ntBASIC17.1■□□□□ 0.33
HLA-BQ31612 AL353135.1-201ENST00000606729 504 ntBASIC17.1■□□□□ 0.33
HLA-BQ31612 AC007064.4-201ENST00000637740 555 ntBASIC17.1■□□□□ 0.33
HLA-BQ31612 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HLA-BQ31612 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HLA-BQ31612 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HLA-BQ31612 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HLA-BQ31612 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HLA-BQ31612 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-BQ31612 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-BQ31612 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HLA-BQ31612 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
HLA-BQ31612 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-BQ31612 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
HLA-BQ31612 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 LINC00982-205ENST00000420957 435 ntBASIC17.09■□□□□ 0.33
HLA-BQ31612 AP000344.2-201ENST00000512987 629 ntBASIC17.09■□□□□ 0.33
HLA-BQ31612 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
HLA-BQ31612 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HLA-BQ31612 AC023141.13-201ENST00000604991 943 ntBASIC17.09■□□□□ 0.33
HLA-BQ31612 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-BQ31612 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HLA-BQ31612 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-BQ31612 AC093028.1-201ENST00000622998 982 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms