Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.49■□□□□ 0.23
PRICKLE4Q2TBC4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 HCG4P8-203ENST00000443049 980 ntBASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 AC002558.1-201ENST00000488906 803 ntBASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 AC019129.2-201ENST00000609837 1235 ntBASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 BCL2-203ENST00000589955 5011 ntBASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE4Q2TBC4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 INTS4P1-201ENST00000438455 1935 ntBASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 POM121L3P-201ENST00000419331 1163 ntBASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 AC103564.2-201ENST00000432853 1299 ntBASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 AC096582.2-201ENST00000510860 516 ntBASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 AC099336.1-202ENST00000602961 463 ntBASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRICKLE4Q2TBC4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.46■□□□□ 0.23
PRICKLE4Q2TBC4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE4Q2TBC4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE4Q2TBC4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE4Q2TBC4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE4Q2TBC4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE4Q2TBC4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE4Q2TBC4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRICKLE4Q2TBC4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms