Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.39■■□□□ 1.01
RFX7Q2KHR2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 MIR574-201ENST00000385209 96 ntBASIC21.38■■□□□ 1.01
RFX7Q2KHR2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 FAM220CP-201ENST00000395253 831 ntBASIC21.38■■□□□ 1.01
RFX7Q2KHR2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 RNPS1P1-201ENST00000507437 918 ntBASIC21.38■■□□□ 1.01
RFX7Q2KHR2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 AC073648.2-201ENST00000510116 352 ntBASIC21.38■■□□□ 1.01
RFX7Q2KHR2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 AC019129.2-201ENST00000609837 1235 ntBASIC21.38■■□□□ 1.01
RFX7Q2KHR2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 AF228730.7-201ENST00000641842 219 ntBASIC21.38■■□□□ 1.01
RFX7Q2KHR2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
RFX7Q2KHR2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 AL355312.1-201ENST00000407115 2176 ntBASIC21.37■■□□□ 1.01
RFX7Q2KHR2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFX7Q2KHR2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 AC021087.4-201ENST00000563761 564 ntBASIC21.36■■□□□ 1.01
RFX7Q2KHR2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 AC025062.2-201ENST00000605477 670 ntBASIC21.36■■□□□ 1.01
RFX7Q2KHR2 LINC00896-202ENST00000609602 2128 ntBASIC21.36■■□□□ 1.01
RFX7Q2KHR2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 AL138688.1-201ENST00000624851 1594 ntBASIC21.36■■□□□ 1.01
RFX7Q2KHR2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 AC139887.3-201ENST00000568585 713 ntBASIC21.36■■□□□ 1.01
RFX7Q2KHR2 AC006538.3-201ENST00000612495 578 ntBASIC21.36■■□□□ 1.01
RFX7Q2KHR2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX7Q2KHR2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms