Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.57■□□□□ 0.88
SSRP1Q08945 DRAXINP1-201ENST00000437611 948 ntBASIC20.57■□□□□ 0.88
SSRP1Q08945 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.57■□□□□ 0.88
SSRP1Q08945 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 TPSP2-201ENST00000561760 610 ntBASIC20.57■□□□□ 0.88
SSRP1Q08945 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.57■□□□□ 0.88
SSRP1Q08945 AL138831.2-201ENST00000606564 490 ntBASIC20.57■□□□□ 0.88
SSRP1Q08945 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SSRP1Q08945 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.57■□□□□ 0.88
SSRP1Q08945 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SSRP1Q08945 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSRP1Q08945 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.57■□□□□ 0.88
SSRP1Q08945 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.57■□□□□ 0.88
SSRP1Q08945 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.56■□□□□ 0.88
SSRP1Q08945 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.56■□□□□ 0.88
SSRP1Q08945 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSRP1Q08945 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSRP1Q08945 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.56■□□□□ 0.88
SSRP1Q08945 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSRP1Q08945 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.56■□□□□ 0.88
SSRP1Q08945 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSRP1Q08945 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSRP1Q08945 AC007967.3-201ENST00000434308 558 ntBASIC20.56■□□□□ 0.88
SSRP1Q08945 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.56■□□□□ 0.88
SSRP1Q08945 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.56■□□□□ 0.88
SSRP1Q08945 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.56■□□□□ 0.88
SSRP1Q08945 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.56■□□□□ 0.88
SSRP1Q08945 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.56■□□□□ 0.88
SSRP1Q08945 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.56■□□□□ 0.88
SSRP1Q08945 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.56■□□□□ 0.88
SSRP1Q08945 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.56■□□□□ 0.88
SSRP1Q08945 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSRP1Q08945 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSRP1Q08945 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SSRP1Q08945 AC233702.3-201ENST00000578656 1387 ntBASIC20.56■□□□□ 0.88
SSRP1Q08945 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SSRP1Q08945 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSRP1Q08945 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSRP1Q08945 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SSRP1Q08945 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.55■□□□□ 0.88
SSRP1Q08945 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.55■□□□□ 0.88
SSRP1Q08945 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSRP1Q08945 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSRP1Q08945 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSRP1Q08945 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSRP1Q08945 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.55■□□□□ 0.88
SSRP1Q08945 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSRP1Q08945 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SSRP1Q08945 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSRP1Q08945 COX5BP2-201ENST00000392354 334 ntBASIC20.55■□□□□ 0.88
SSRP1Q08945 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.55■□□□□ 0.88
SSRP1Q08945 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSRP1Q08945 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.55■□□□□ 0.88
SSRP1Q08945 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.55■□□□□ 0.88
SSRP1Q08945 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SSRP1Q08945 AP005901.3-202ENST00000581653 237 ntBASIC20.55■□□□□ 0.88
SSRP1Q08945 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.55■□□□□ 0.88
SSRP1Q08945 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.55■□□□□ 0.88
SSRP1Q08945 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.55■□□□□ 0.88
SSRP1Q08945 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSRP1Q08945 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
SSRP1Q08945 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSRP1Q08945 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.55■□□□□ 0.88
SSRP1Q08945 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSRP1Q08945 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSRP1Q08945 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SSRP1Q08945 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSRP1Q08945 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
SSRP1Q08945 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSRP1Q08945 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SSRP1Q08945 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSRP1Q08945 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSRP1Q08945 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SSRP1Q08945 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSRP1Q08945 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.54■□□□□ 0.88
SSRP1Q08945 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SSRP1Q08945 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSRP1Q08945 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SSRP1Q08945 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSRP1Q08945 TOB2P1-201ENST00000469761 992 ntBASIC20.54■□□□□ 0.88
SSRP1Q08945 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.54■□□□□ 0.88
SSRP1Q08945 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
SSRP1Q08945 MIR3180-1-201ENST00000580374 94 ntBASIC20.54■□□□□ 0.88
SSRP1Q08945 MIR3180-3-201ENST00000584616 94 ntBASIC20.54■□□□□ 0.88
SSRP1Q08945 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.54■□□□□ 0.88
SSRP1Q08945 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.54■□□□□ 0.88
SSRP1Q08945 NPAP1P7-201ENST00000613027 823 ntBASIC20.54■□□□□ 0.88
SSRP1Q08945 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSRP1Q08945 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.54■□□□□ 0.88
SSRP1Q08945 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.54■□□□□ 0.88
SSRP1Q08945 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms