Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 FLJ16779-201ENST00000612722 7638 ntBASIC13.61□□□□□ -0.23
HIST1H1AQ02539 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 MMP23A-201ENST00000234610 1017 ntBASIC13.61□□□□□ -0.23
HIST1H1AQ02539 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 AC009947.2-201ENST00000444014 672 ntBASIC13.61□□□□□ -0.23
HIST1H1AQ02539 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 AC010240.3-201ENST00000607688 395 ntBASIC13.61□□□□□ -0.23
HIST1H1AQ02539 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 INGX-201ENST00000359239 846 ntBASIC13.6□□□□□ -0.23
HIST1H1AQ02539 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 TSPY15P-201ENST00000457163 923 ntBASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 KRT8P9-201ENST00000558927 1449 ntBASIC13.6□□□□□ -0.23
HIST1H1AQ02539 AL512604.3-201ENST00000569583 964 ntBASIC13.6□□□□□ -0.23
HIST1H1AQ02539 MIR3180-4-201ENST00000582223 153 ntBASIC13.6□□□□□ -0.23
HIST1H1AQ02539 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 AC024243.1-201ENST00000609234 778 ntBASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 CYP2D8P-201ENST00000433633 1490 ntBASIC13.6□□□□□ -0.23
HIST1H1AQ02539 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1AQ02539 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms