Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMGCS1Q01581 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMGCS1Q01581 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGCS1Q01581 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HMGCS1Q01581 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGCS1Q01581 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 TSPY5P-201ENST00000426936 936 ntBASIC17.1■□□□□ 0.33
HMGCS1Q01581 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMGCS1Q01581 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 AP003733.1-201ENST00000491725 852 ntBASIC17.1■□□□□ 0.33
HMGCS1Q01581 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HMGCS1Q01581 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGCS1Q01581 AC006011.2-201ENST00000621313 1158 ntBASIC17.1■□□□□ 0.33
HMGCS1Q01581 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGCS1Q01581 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGCS1Q01581 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCS1Q01581 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCS1Q01581 IGHGP-201ENST00000390555 1178 ntBASIC17.09■□□□□ 0.33
HMGCS1Q01581 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 TMPOP1-202ENST00000424642 1267 ntBASIC17.09■□□□□ 0.33
HMGCS1Q01581 DDX43P3-201ENST00000441064 443 ntBASIC17.09■□□□□ 0.33
HMGCS1Q01581 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.09■□□□□ 0.33
HMGCS1Q01581 AC112698.1-201ENST00000510299 916 ntBASIC17.09■□□□□ 0.33
HMGCS1Q01581 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGCS1Q01581 ZNF444P1-201ENST00000559497 298 ntBASIC17.09■□□□□ 0.33
HMGCS1Q01581 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.09■□□□□ 0.33
HMGCS1Q01581 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCS1Q01581 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGCS1Q01581 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCS1Q01581 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCS1Q01581 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCS1Q01581 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGCS1Q01581 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HMGCS1Q01581 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCS1Q01581 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HMGCS1Q01581 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HMGCS1Q01581 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCS1Q01581 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCS1Q01581 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCS1Q01581 AP001094.4-201ENST00000579008 2176 ntBASIC17.08■□□□□ 0.33
HMGCS1Q01581 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCS1Q01581 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.08■□□□□ 0.33
HMGCS1Q01581 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGCS1Q01581 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 HBZP1-201ENST00000354915 429 ntBASIC17.08■□□□□ 0.32
HMGCS1Q01581 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 MIR662-201ENST00000384847 95 ntBASIC17.08■□□□□ 0.32
HMGCS1Q01581 RNF152P1-201ENST00000397754 604 ntBASIC17.08■□□□□ 0.32
HMGCS1Q01581 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 VENTXP5-201ENST00000523979 775 ntBASIC17.08■□□□□ 0.32
HMGCS1Q01581 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.08■□□□□ 0.32
HMGCS1Q01581 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms