Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
PER3P56645 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PER3P56645 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.44■□□□□ 0.22
PER3P56645 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PER3P56645 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.44■□□□□ 0.22
PER3P56645 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PER3P56645 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 IGHGP-201ENST00000390555 1178 ntBASIC16.44■□□□□ 0.22
PER3P56645 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.44■□□□□ 0.22
PER3P56645 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.44■□□□□ 0.22
PER3P56645 KRT18P67-201ENST00000432816 1264 ntBASIC16.44■□□□□ 0.22
PER3P56645 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.44■□□□□ 0.22
PER3P56645 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.44■□□□□ 0.22
PER3P56645 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.44■□□□□ 0.22
PER3P56645 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PER3P56645 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.44■□□□□ 0.22
PER3P56645 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PER3P56645 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.44■□□□□ 0.22
PER3P56645 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.44■□□□□ 0.22
PER3P56645 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
PER3P56645 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PER3P56645 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PER3P56645 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.43■□□□□ 0.22
PER3P56645 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PER3P56645 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PER3P56645 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.43■□□□□ 0.22
PER3P56645 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.43■□□□□ 0.22
PER3P56645 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 AL357033.4-201ENST00000617703 1807 ntBASIC16.43■□□□□ 0.22
PER3P56645 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.43■□□□□ 0.22
PER3P56645 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.43■□□□□ 0.22
PER3P56645 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PER3P56645 AL031284.1-201ENST00000419297 478 ntBASIC16.43■□□□□ 0.22
PER3P56645 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.43■□□□□ 0.22
PER3P56645 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.43■□□□□ 0.22
PER3P56645 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PER3P56645 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.43■□□□□ 0.22
PER3P56645 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 TERC-201ENST00000602385 541 ntBASIC16.43■□□□□ 0.22
PER3P56645 AC024563.2-201ENST00000603282 481 ntBASIC16.43■□□□□ 0.22
PER3P56645 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PER3P56645 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.43■□□□□ 0.22
PER3P56645 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PER3P56645 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.43■□□□□ 0.22
PER3P56645 PMS2P7-201ENST00000506558 1336 ntBASIC16.43■□□□□ 0.22
PER3P56645 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.42■□□□□ 0.22
PER3P56645 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PER3P56645 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PER3P56645 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.42■□□□□ 0.22
PER3P56645 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.42■□□□□ 0.22
PER3P56645 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.42■□□□□ 0.22
PER3P56645 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.42■□□□□ 0.22
PER3P56645 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.42■□□□□ 0.22
PER3P56645 AF238378.1-201ENST00000526806 358 ntBASIC16.42■□□□□ 0.22
PER3P56645 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms