Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PAX9P55771 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PAX9P55771 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.24□□□□□ -0.13
PAX9P55771 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PAX9P55771 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PAX9P55771 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PAX9P55771 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PAX9P55771 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PAX9P55771 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.24□□□□□ -0.13
PAX9P55771 RPPH1-201ENST00000516869 333 ntBASIC14.24□□□□□ -0.13
PAX9P55771 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.24□□□□□ -0.13
PAX9P55771 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.24□□□□□ -0.13
PAX9P55771 CD177P1-201ENST00000606252 935 ntBASIC14.24□□□□□ -0.13
PAX9P55771 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.24□□□□□ -0.13
PAX9P55771 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PAX9P55771 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.24□□□□□ -0.13
PAX9P55771 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PAX9P55771 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PAX9P55771 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.24□□□□□ -0.13
PAX9P55771 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.24□□□□□ -0.13
PAX9P55771 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.24□□□□□ -0.13
PAX9P55771 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PAX9P55771 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.23□□□□□ -0.13
PAX9P55771 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.23□□□□□ -0.13
PAX9P55771 AC046185.3-201ENST00000623228 1824 ntBASIC14.23□□□□□ -0.13
PAX9P55771 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.23□□□□□ -0.13
PAX9P55771 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.23□□□□□ -0.13
PAX9P55771 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
PAX9P55771 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 KRT18P29-201ENST00000397031 1267 ntBASIC14.23□□□□□ -0.13
PAX9P55771 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 CRYGFP-201ENST00000418459 633 ntBASIC14.23□□□□□ -0.13
PAX9P55771 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.23□□□□□ -0.13
PAX9P55771 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.23□□□□□ -0.13
PAX9P55771 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PAX9P55771 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PAX9P55771 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.22□□□□□ -0.13
PAX9P55771 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PAX9P55771 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.22□□□□□ -0.13
PAX9P55771 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PAX9P55771 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
PAX9P55771 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PAX9P55771 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
PAX9P55771 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.22□□□□□ -0.13
PAX9P55771 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.22□□□□□ -0.13
PAX9P55771 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 NUDT16P1-203ENST00000513809 620 ntBASIC14.22□□□□□ -0.13
PAX9P55771 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.22□□□□□ -0.13
PAX9P55771 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.22□□□□□ -0.13
PAX9P55771 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
PAX9P55771 AL353719.1-201ENST00000566847 864 ntBASIC14.22□□□□□ -0.13
PAX9P55771 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
PAX9P55771 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.22□□□□□ -0.13
PAX9P55771 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.22□□□□□ -0.13
PAX9P55771 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PAX9P55771 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PAX9P55771 LINC02199-201ENST00000506655 2702 ntBASIC14.22□□□□□ -0.13
PAX9P55771 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PAX9P55771 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.22□□□□□ -0.13
PAX9P55771 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms