Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PTPN5P54829 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN5P54829 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.27■□□□□ 0.52
PTPN5P54829 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PTPN5P54829 HCG11-201ENST00000411553 5696 ntBASIC18.27■□□□□ 0.52
PTPN5P54829 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PTPN5P54829 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.27■□□□□ 0.52
PTPN5P54829 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN5P54829 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN5P54829 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN5P54829 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPN5P54829 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN5P54829 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.27■□□□□ 0.52
PTPN5P54829 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.27■□□□□ 0.52
PTPN5P54829 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN5P54829 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPN5P54829 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN5P54829 AC027612.4-201ENST00000605371 583 ntBASIC18.27■□□□□ 0.52
PTPN5P54829 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PTPN5P54829 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN5P54829 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN5P54829 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PTPN5P54829 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.27■□□□□ 0.51
PTPN5P54829 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.27■□□□□ 0.51
PTPN5P54829 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN5P54829 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN5P54829 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.27■□□□□ 0.51
PTPN5P54829 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.27■□□□□ 0.51
PTPN5P54829 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN5P54829 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN5P54829 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN5P54829 AC097374.2-201ENST00000618617 1306 ntBASIC18.26■□□□□ 0.51
PTPN5P54829 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN5P54829 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN5P54829 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN5P54829 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
PTPN5P54829 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN5P54829 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN5P54829 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN5P54829 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN5P54829 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN5P54829 DUX4L17-201ENST00000557360 1267 ntBASIC18.26■□□□□ 0.51
PTPN5P54829 AC005593.1-201ENST00000624894 515 ntBASIC18.26■□□□□ 0.51
PTPN5P54829 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN5P54829 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN5P54829 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN5P54829 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN5P54829 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN5P54829 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PTPN5P54829 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN5P54829 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTPN5P54829 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN5P54829 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN5P54829 AC069262.1-201ENST00000539058 672 ntBASIC18.25■□□□□ 0.51
PTPN5P54829 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPN5P54829 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPN5P54829 AC004449.1-201ENST00000564240 433 ntBASIC18.25■□□□□ 0.51
PTPN5P54829 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.25■□□□□ 0.51
PTPN5P54829 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTPN5P54829 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPN5P54829 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PTPN5P54829 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN5P54829 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTPN5P54829 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN5P54829 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PTPN5P54829 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN5P54829 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PTPN5P54829 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN5P54829 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
PTPN5P54829 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms