Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 AC067852.2-201ENST00000590513 2313 ntBASIC19.92■□□□□ 0.78
EPHB4P54760 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHB4P54760 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
EPHB4P54760 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHB4P54760 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHB4P54760 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
EPHB4P54760 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.92■□□□□ 0.78
EPHB4P54760 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHB4P54760 OR7E14P-202ENST00000530490 1290 ntBASIC19.92■□□□□ 0.78
EPHB4P54760 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHB4P54760 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHB4P54760 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
EPHB4P54760 AC025062.2-201ENST00000605477 670 ntBASIC19.92■□□□□ 0.78
EPHB4P54760 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHB4P54760 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHB4P54760 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHB4P54760 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
EPHB4P54760 AC007967.2-201ENST00000432613 625 ntBASIC19.91■□□□□ 0.78
EPHB4P54760 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.91■□□□□ 0.78
EPHB4P54760 MIR3197-201ENST00000582241 73 ntBASIC19.91■□□□□ 0.78
EPHB4P54760 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.91■□□□□ 0.78
EPHB4P54760 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
EPHB4P54760 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.91■□□□□ 0.78
EPHB4P54760 KRT8P50-201ENST00000562022 1438 ntBASIC19.91■□□□□ 0.78
EPHB4P54760 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHB4P54760 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
EPHB4P54760 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB4P54760 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB4P54760 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB4P54760 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB4P54760 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB4P54760 AC004832.2-201ENST00000426397 482 ntBASIC19.9■□□□□ 0.78
EPHB4P54760 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.9■□□□□ 0.78
EPHB4P54760 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.9■□□□□ 0.78
EPHB4P54760 UNC93B6-202ENST00000528242 690 ntBASIC19.9■□□□□ 0.78
EPHB4P54760 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.9■□□□□ 0.78
EPHB4P54760 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB4P54760 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB4P54760 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.9■□□□□ 0.78
EPHB4P54760 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
EPHB4P54760 KRT18P28-201ENST00000453838 1332 ntBASIC19.9■□□□□ 0.78
EPHB4P54760 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB4P54760 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB4P54760 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
EPHB4P54760 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB4P54760 ANO7L1-203ENST00000602586 1720 ntBASIC19.9■□□□□ 0.78
EPHB4P54760 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.9■□□□□ 0.78
EPHB4P54760 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
EPHB4P54760 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB4P54760 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHB4P54760 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHB4P54760 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHB4P54760 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHB4P54760 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHB4P54760 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EPHB4P54760 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.89■□□□□ 0.77
EPHB4P54760 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHB4P54760 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
EPHB4P54760 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms