Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.92■□□□□ 0.94
CACNB3P54284 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CACNB3P54284 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.92■□□□□ 0.94
CACNB3P54284 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNB3P54284 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNB3P54284 AL020996.1-203ENST00000536896 2307 ntBASIC20.92■□□□□ 0.94
CACNB3P54284 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNB3P54284 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNB3P54284 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNB3P54284 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CACNB3P54284 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNB3P54284 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.91■□□□□ 0.94
CACNB3P54284 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CACNB3P54284 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CACNB3P54284 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.91■□□□□ 0.94
CACNB3P54284 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.91■□□□□ 0.94
CACNB3P54284 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.91■□□□□ 0.94
CACNB3P54284 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.91■□□□□ 0.94
CACNB3P54284 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CACNB3P54284 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CACNB3P54284 AC008667.4-201ENST00000607370 168 ntBASIC20.91■□□□□ 0.94
CACNB3P54284 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
CACNB3P54284 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CACNB3P54284 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNB3P54284 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CACNB3P54284 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNB3P54284 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CACNB3P54284 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CACNB3P54284 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNB3P54284 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNB3P54284 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNB3P54284 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
CACNB3P54284 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNB3P54284 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.9■□□□□ 0.94
CACNB3P54284 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNB3P54284 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CACNB3P54284 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.9■□□□□ 0.94
CACNB3P54284 IGLL3P-201ENST00000412472 434 ntBASIC20.9■□□□□ 0.94
CACNB3P54284 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.9■□□□□ 0.94
CACNB3P54284 HTR5BP-201ENST00000430851 1154 ntBASIC20.9■□□□□ 0.94
CACNB3P54284 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNB3P54284 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNB3P54284 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNB3P54284 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
CACNB3P54284 MIR4469-201ENST00000583919 79 ntBASIC20.9■□□□□ 0.94
CACNB3P54284 STK25P1-201ENST00000585406 838 ntBASIC20.9■□□□□ 0.94
CACNB3P54284 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNB3P54284 AL078644.1-201ENST00000609881 752 ntBASIC20.9■□□□□ 0.94
CACNB3P54284 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNB3P54284 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNB3P54284 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNB3P54284 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNB3P54284 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNB3P54284 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.9■□□□□ 0.94
CACNB3P54284 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNB3P54284 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CACNB3P54284 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.89■□□□□ 0.94
CACNB3P54284 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CACNB3P54284 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CACNB3P54284 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNB3P54284 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNB3P54284 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CACNB3P54284 AC097637.2-201ENST00000624096 1997 ntBASIC20.89■□□□□ 0.93
CACNB3P54284 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNB3P54284 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CACNB3P54284 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CACNB3P54284 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.89■□□□□ 0.93
CACNB3P54284 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.89■□□□□ 0.93
CACNB3P54284 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.89■□□□□ 0.93
CACNB3P54284 STK19B-204ENST00000512515 211 ntBASIC20.89■□□□□ 0.93
CACNB3P54284 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.89■□□□□ 0.93
CACNB3P54284 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.89■□□□□ 0.93
CACNB3P54284 AC005829.1-201ENST00000570002 483 ntBASIC20.89■□□□□ 0.93
CACNB3P54284 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.89■□□□□ 0.93
CACNB3P54284 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CACNB3P54284 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNB3P54284 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNB3P54284 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
CACNB3P54284 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNB3P54284 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
CACNB3P54284 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CACNB3P54284 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.89■□□□□ 0.93
CACNB3P54284 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CACNB3P54284 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CACNB3P54284 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.88■□□□□ 0.93
CACNB3P54284 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CACNB3P54284 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNB3P54284 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNB3P54284 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNB3P54284 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CACNB3P54284 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CACNB3P54284 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.88■□□□□ 0.93
CACNB3P54284 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CACNB3P54284 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.88■□□□□ 0.93
CACNB3P54284 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNB3P54284 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CACNB3P54284 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.88■□□□□ 0.93
CACNB3P54284 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CACNB3P54284 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.88■□□□□ 0.93
CACNB3P54284 GPR89P-201ENST00000407924 1495 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms