Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.21■□□□□ 0.35
CLCN2P51788 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN2P51788 AC009065.1-201ENST00000564055 1225 ntBASIC17.21■□□□□ 0.35
CLCN2P51788 MIR3180-4-201ENST00000582223 153 ntBASIC17.21■□□□□ 0.35
CLCN2P51788 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCN2P51788 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.21■□□□□ 0.35
CLCN2P51788 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN2P51788 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN2P51788 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN2P51788 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN2P51788 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN2P51788 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CLCN2P51788 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLCN2P51788 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CLCN2P51788 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCN2P51788 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN2P51788 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN2P51788 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN2P51788 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.2■□□□□ 0.34
CLCN2P51788 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN2P51788 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
CLCN2P51788 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLCN2P51788 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN2P51788 AL157888.1-201ENST00000631930 593 ntBASIC17.2■□□□□ 0.34
CLCN2P51788 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN2P51788 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN2P51788 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN2P51788 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN2P51788 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLCN2P51788 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLCN2P51788 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLCN2P51788 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCN2P51788 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLCN2P51788 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCN2P51788 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCN2P51788 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.19■□□□□ 0.34
CLCN2P51788 ZNF444P1-201ENST00000559497 298 ntBASIC17.19■□□□□ 0.34
CLCN2P51788 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN2P51788 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLCN2P51788 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN2P51788 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CLCN2P51788 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN2P51788 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLCN2P51788 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN2P51788 REXO1L9P-201ENST00000604264 2108 ntBASIC17.18■□□□□ 0.34
CLCN2P51788 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN2P51788 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN2P51788 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLCN2P51788 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN2P51788 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN2P51788 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN2P51788 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN2P51788 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN2P51788 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN2P51788 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN2P51788 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CLCN2P51788 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CLCN2P51788 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.18■□□□□ 0.34
CLCN2P51788 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN2P51788 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCN2P51788 AC091076.1-201ENST00000610741 619 ntBASIC17.18■□□□□ 0.34
CLCN2P51788 AC083849.1-201ENST00000615227 514 ntBASIC17.18■□□□□ 0.34
CLCN2P51788 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN2P51788 HYMAI.1-201ENST00000620949 238 ntBASIC17.18■□□□□ 0.34
CLCN2P51788 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN2P51788 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms