Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
UBE2AP49459 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 ECEL1P2-202ENST00000465689 757 ntBASIC11.28□□□□□ -0.6
UBE2AP49459 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2AP49459 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 FLJ13224-201ENST00000313737 1514 ntBASIC11.28□□□□□ -0.6
UBE2AP49459 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2AP49459 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2AP49459 UROS-202ENST00000368778 1556 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
UBE2AP49459 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC11.27□□□□□ -0.6
UBE2AP49459 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC11.27□□□□□ -0.6
UBE2AP49459 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC11.27□□□□□ -0.6
UBE2AP49459 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC11.27□□□□□ -0.6
UBE2AP49459 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2AP49459 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC11.27□□□□□ -0.6
UBE2AP49459 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2AP49459 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2AP49459 CYP2D8P-201ENST00000433633 1490 ntBASIC11.27□□□□□ -0.6
UBE2AP49459 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2AP49459 SDHAP2-201ENST00000455183 2001 ntBASIC11.27□□□□□ -0.61
UBE2AP49459 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
UBE2AP49459 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
UBE2AP49459 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
UBE2AP49459 KIRREL3-AS3-201ENST00000404882 831 ntBASIC11.27□□□□□ -0.61
UBE2AP49459 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2AP49459 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2AP49459 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2AP49459 MNT-208ENST00000575394 606 ntTSL 4 BASIC11.27□□□□□ -0.61
UBE2AP49459 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
UBE2AP49459 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2AP49459 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
UBE2AP49459 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
UBE2AP49459 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC11.27□□□□□ -0.61
UBE2AP49459 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2AP49459 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2AP49459 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms