Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 YBX1P2-201ENST00000489612 999 ntBASIC17.22■□□□□ 0.35
KRT6CP48668 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT6CP48668 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.22■□□□□ 0.35
KRT6CP48668 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 AC004263.2-201ENST00000617183 678 ntBASIC17.22■□□□□ 0.35
KRT6CP48668 LINC01451-201ENST00000623792 534 ntBASIC17.22■□□□□ 0.35
KRT6CP48668 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT6CP48668 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT6CP48668 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6CP48668 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
KRT6CP48668 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6CP48668 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 AC012313.1-201ENST00000593393 3059 ntBASIC17.22■□□□□ 0.35
KRT6CP48668 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT6CP48668 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT6CP48668 HLA-J-201ENST00000462773 1622 ntBASIC17.21■□□□□ 0.35
KRT6CP48668 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 AC139713.2-201ENST00000641328 2723 ntBASIC17.21■□□□□ 0.35
KRT6CP48668 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT6CP48668 TNRC18P3-201ENST00000441896 2691 ntBASIC17.21■□□□□ 0.35
KRT6CP48668 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 AL645608.8-201ENST00000606034 2086 ntBASIC17.21■□□□□ 0.35
KRT6CP48668 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 LINC00304-203ENST00000565008 1864 ntBASIC17.21■□□□□ 0.35
KRT6CP48668 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT6CP48668 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KRT6CP48668 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.21■□□□□ 0.35
KRT6CP48668 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT6CP48668 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
KRT6CP48668 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT6CP48668 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT6CP48668 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
KRT6CP48668 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT6CP48668 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 AL023806.1-201ENST00000603994 1649 ntBASIC17.21■□□□□ 0.35
KRT6CP48668 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6CP48668 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
KRT6CP48668 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
KRT6CP48668 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
KRT6CP48668 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
KRT6CP48668 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KRT6CP48668 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KRT6CP48668 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 ZNF444P1-201ENST00000559497 298 ntBASIC17.2■□□□□ 0.34
KRT6CP48668 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
KRT6CP48668 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.2■□□□□ 0.34
KRT6CP48668 AC141586.5-201ENST00000624546 2050 ntBASIC17.2■□□□□ 0.34
KRT6CP48668 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT6CP48668 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6CP48668 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KRT6CP48668 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
KRT6CP48668 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT6CP48668 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 KRT8P47-201ENST00000604727 1398 ntBASIC17.19■□□□□ 0.34
KRT6CP48668 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 PP12613-201ENST00000424958 2230 ntBASIC17.19■□□□□ 0.34
KRT6CP48668 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 HOMER2P1-201ENST00000455653 964 ntBASIC17.19■□□□□ 0.34
KRT6CP48668 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT6CP48668 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
KRT6CP48668 AP003733.1-201ENST00000491725 852 ntBASIC17.19■□□□□ 0.34
KRT6CP48668 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT6CP48668 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.19■□□□□ 0.34
KRT6CP48668 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.19■□□□□ 0.34
KRT6CP48668 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6CP48668 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms