Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC31■■■□□ 2.55
NCAPD3P42695 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC31■■■□□ 2.55
NCAPD3P42695 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
NCAPD3P42695 GATD1-206ENST00000526325 756 ntTSL 5 BASIC31■■■□□ 2.55
NCAPD3P42695 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC31■■■□□ 2.55
NCAPD3P42695 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC31■■■□□ 2.55
NCAPD3P42695 BX276092.7-203ENST00000637198 1536 ntBASIC31■■■□□ 2.55
NCAPD3P42695 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC31■■■□□ 2.55
NCAPD3P42695 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC30.99■■■□□ 2.55
NCAPD3P42695 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC30.99■■■□□ 2.55
NCAPD3P42695 AC129492.6-201ENST00000611383 1305 ntBASIC30.99■■■□□ 2.55
NCAPD3P42695 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC30.99■■■□□ 2.55
NCAPD3P42695 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC30.99■■■□□ 2.55
NCAPD3P42695 HARS-203ENST00000431330 1774 ntTSL 2 BASIC30.99■■■□□ 2.55
NCAPD3P42695 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
NCAPD3P42695 U91328.1-201ENST00000437528 223 ntBASIC30.99■■■□□ 2.55
NCAPD3P42695 PPP6R2P1-201ENST00000450880 1275 ntBASIC30.99■■■□□ 2.55
NCAPD3P42695 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC30.99■■■□□ 2.55
NCAPD3P42695 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC30.99■■■□□ 2.55
NCAPD3P42695 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC30.99■■■□□ 2.55
NCAPD3P42695 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC30.99■■■□□ 2.55
NCAPD3P42695 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
NCAPD3P42695 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC30.99■■■□□ 2.55
NCAPD3P42695 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
NCAPD3P42695 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC30.99■■■□□ 2.55
NCAPD3P42695 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
NCAPD3P42695 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC30.98■■■□□ 2.55
NCAPD3P42695 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NCAPD3P42695 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NCAPD3P42695 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
NCAPD3P42695 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC30.98■■■□□ 2.55
NCAPD3P42695 IGHV3-52-201ENST00000519770 353 ntBASIC30.98■■■□□ 2.55
NCAPD3P42695 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC30.98■■■□□ 2.55
NCAPD3P42695 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC30.98■■■□□ 2.55
NCAPD3P42695 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC30.98■■■□□ 2.55
NCAPD3P42695 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC30.98■■■□□ 2.55
NCAPD3P42695 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NCAPD3P42695 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NCAPD3P42695 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NCAPD3P42695 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NCAPD3P42695 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NCAPD3P42695 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
NCAPD3P42695 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NCAPD3P42695 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NCAPD3P42695 ARSEP1-201ENST00000420443 635 ntBASIC30.97■■■□□ 2.55
NCAPD3P42695 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
NCAPD3P42695 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NCAPD3P42695 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NCAPD3P42695 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC30.97■■■□□ 2.55
NCAPD3P42695 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC30.97■■■□□ 2.55
NCAPD3P42695 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC30.96■■■□□ 2.55
NCAPD3P42695 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC30.96■■■□□ 2.55
NCAPD3P42695 SPDYE7P-202ENST00000420373 878 ntBASIC30.96■■■□□ 2.55
NCAPD3P42695 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 AC069120.2-201ENST00000524091 540 ntBASIC30.96■■■□□ 2.55
NCAPD3P42695 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC30.96■■■□□ 2.55
NCAPD3P42695 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NCAPD3P42695 TDG-209ENST00000544861 1387 ntTSL 2 BASIC30.96■■■□□ 2.55
NCAPD3P42695 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC30.95■■■□□ 2.55
NCAPD3P42695 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC30.95■■■□□ 2.55
NCAPD3P42695 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC30.95■■■□□ 2.55
NCAPD3P42695 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC30.95■■■□□ 2.55
NCAPD3P42695 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
NCAPD3P42695 KRT8P23-201ENST00000560090 1207 ntBASIC30.95■■■□□ 2.55
NCAPD3P42695 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC30.95■■■□□ 2.55
NCAPD3P42695 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
NCAPD3P42695 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC30.95■■■□□ 2.55
NCAPD3P42695 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
NCAPD3P42695 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
NCAPD3P42695 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
NCAPD3P42695 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC30.95■■■□□ 2.54
NCAPD3P42695 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC30.95■■■□□ 2.54
NCAPD3P42695 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC30.95■■■□□ 2.54
NCAPD3P42695 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC30.95■■■□□ 2.54
NCAPD3P42695 AC027307.3-201ENST00000594262 1100 ntBASIC30.95■■■□□ 2.54
NCAPD3P42695 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
NCAPD3P42695 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms