Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
KDM5CP41229 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
KDM5CP41229 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC26.31■■□□□ 1.8
KDM5CP41229 CYP51A1P2-201ENST00000419457 1499 ntBASIC26.31■■□□□ 1.8
KDM5CP41229 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC26.31■■□□□ 1.8
KDM5CP41229 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KDM5CP41229 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KDM5CP41229 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KDM5CP41229 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC26.31■■□□□ 1.8
KDM5CP41229 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC26.31■■□□□ 1.8
KDM5CP41229 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
KDM5CP41229 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC26.31■■□□□ 1.8
KDM5CP41229 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KDM5CP41229 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC26.31■■□□□ 1.8
KDM5CP41229 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KDM5CP41229 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KDM5CP41229 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KDM5CP41229 AC097637.2-201ENST00000624096 1997 ntBASIC26.3■■□□□ 1.8
KDM5CP41229 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KDM5CP41229 BAD-202ENST00000394531 631 ntTSL 3 BASIC26.3■■□□□ 1.8
KDM5CP41229 DDX43P3-201ENST00000441064 443 ntBASIC26.3■■□□□ 1.8
KDM5CP41229 AC093214.1-201ENST00000511688 1107 ntBASIC26.3■■□□□ 1.8
KDM5CP41229 AC112191.1-201ENST00000523689 701 ntBASIC26.3■■□□□ 1.8
KDM5CP41229 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC26.3■■□□□ 1.8
KDM5CP41229 AC190387.1-201ENST00000551683 408 ntBASIC26.3■■□□□ 1.8
KDM5CP41229 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC26.3■■□□□ 1.8
KDM5CP41229 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC26.3■■□□□ 1.8
KDM5CP41229 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC26.3■■□□□ 1.8
KDM5CP41229 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KDM5CP41229 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
KDM5CP41229 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC26.3■■□□□ 1.8
KDM5CP41229 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
KDM5CP41229 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KDM5CP41229 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KDM5CP41229 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
KDM5CP41229 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KDM5CP41229 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 METTL26-204ENST00000397665 558 ntTSL 2 BASIC26.29■■□□□ 1.8
KDM5CP41229 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC26.29■■□□□ 1.8
KDM5CP41229 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC26.29■■□□□ 1.8
KDM5CP41229 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 RPL28-209ENST00000560055 670 ntTSL 3 BASIC26.29■■□□□ 1.8
KDM5CP41229 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC26.29■■□□□ 1.8
KDM5CP41229 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC26.29■■□□□ 1.8
KDM5CP41229 HFE2-206ENST00000634927 506 ntTSL 4 BASIC26.29■■□□□ 1.8
KDM5CP41229 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
KDM5CP41229 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC26.29■■□□□ 1.8
KDM5CP41229 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC26.29■■□□□ 1.8
KDM5CP41229 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
KDM5CP41229 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KDM5CP41229 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC26.29■■□□□ 1.8
KDM5CP41229 DUT-210ENST00000559935 569 ntTSL 3 BASIC26.29■■□□□ 1.8
KDM5CP41229 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC26.28■■□□□ 1.8
KDM5CP41229 AC100803.2-201ENST00000562459 1963 ntBASIC26.28■■□□□ 1.8
KDM5CP41229 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KDM5CP41229 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KDM5CP41229 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC26.28■■□□□ 1.8
KDM5CP41229 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
KDM5CP41229 HLA-DRB6-201ENST00000411500 1235 ntBASIC26.28■■□□□ 1.8
KDM5CP41229 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC26.28■■□□□ 1.8
KDM5CP41229 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC26.28■■□□□ 1.8
KDM5CP41229 NAA60-208ENST00000570819 833 ntTSL 2 BASIC26.28■■□□□ 1.8
KDM5CP41229 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
KDM5CP41229 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
KDM5CP41229 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KDM5CP41229 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC26.27■■□□□ 1.8
KDM5CP41229 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KDM5CP41229 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KDM5CP41229 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
KDM5CP41229 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC26.27■■□□□ 1.8
KDM5CP41229 AC015922.1-201ENST00000421102 1152 ntBASIC26.27■■□□□ 1.8
KDM5CP41229 GPS2P2-201ENST00000430745 888 ntBASIC26.27■■□□□ 1.8
KDM5CP41229 NMU-203ENST00000507338 658 ntTSL 3 BASIC26.27■■□□□ 1.8
KDM5CP41229 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC26.27■■□□□ 1.8
KDM5CP41229 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KDM5CP41229 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KDM5CP41229 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
KDM5CP41229 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KDM5CP41229 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KDM5CP41229 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
KDM5CP41229 AC093503.3-201ENST00000624917 2352 ntBASIC26.26■■□□□ 1.79
KDM5CP41229 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC26.26■■□□□ 1.79
KDM5CP41229 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC26.26■■□□□ 1.79
KDM5CP41229 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
KDM5CP41229 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KDM5CP41229 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
KDM5CP41229 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
KDM5CP41229 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms