Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLP35914 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
HMGCLP35914 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HMGCLP35914 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLP35914 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCLP35914 LINC00896-202ENST00000609602 2128 ntBASIC17.65■□□□□ 0.42
HMGCLP35914 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLP35914 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.64■□□□□ 0.42
HMGCLP35914 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.64■□□□□ 0.42
HMGCLP35914 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HMGCLP35914 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGCLP35914 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLP35914 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
HMGCLP35914 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCLP35914 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HMGCLP35914 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGCLP35914 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLP35914 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLP35914 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLP35914 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLP35914 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HMGCLP35914 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLP35914 AC002558.1-201ENST00000488906 803 ntBASIC17.64■□□□□ 0.41
HMGCLP35914 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGCLP35914 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGCLP35914 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGCLP35914 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HMGCLP35914 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HMGCLP35914 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLP35914 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLP35914 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HMGCLP35914 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLP35914 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HMGCLP35914 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLP35914 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HMGCLP35914 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HMGCLP35914 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HMGCLP35914 KRT16P4-201ENST00000453883 522 ntBASIC17.63■□□□□ 0.41
HMGCLP35914 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCLP35914 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.63■□□□□ 0.41
HMGCLP35914 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.63■□□□□ 0.41
HMGCLP35914 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCLP35914 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HMGCLP35914 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HMGCLP35914 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCLP35914 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HMGCLP35914 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCLP35914 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCLP35914 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLP35914 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCLP35914 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCLP35914 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLP35914 AL049757.1-201ENST00000616842 1596 ntBASIC17.62■□□□□ 0.41
HMGCLP35914 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCLP35914 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HMGCLP35914 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCLP35914 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HMGCLP35914 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLP35914 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HMGCLP35914 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
HMGCLP35914 KRT18P56-201ENST00000507275 550 ntBASIC17.62■□□□□ 0.41
HMGCLP35914 FOSL1P1-201ENST00000511041 816 ntBASIC17.62■□□□□ 0.41
HMGCLP35914 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.62■□□□□ 0.41
HMGCLP35914 MIR5100-201ENST00000579544 119 ntBASIC17.62■□□□□ 0.41
HMGCLP35914 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.62■□□□□ 0.41
HMGCLP35914 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCLP35914 AC019129.2-201ENST00000609837 1235 ntBASIC17.62■□□□□ 0.41
HMGCLP35914 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HMGCLP35914 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCLP35914 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLP35914 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCLP35914 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCLP35914 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCLP35914 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLP35914 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCLP35914 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLP35914 SIRPAP1-201ENST00000448467 1770 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms