Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MCM4P33991 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.91■□□□□ 0.94
MCM4P33991 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
MCM4P33991 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.9■□□□□ 0.94
MCM4P33991 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
MCM4P33991 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
MCM4P33991 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.9■□□□□ 0.94
MCM4P33991 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 MIR1238-201ENST00000408483 83 ntBASIC20.9■□□□□ 0.94
MCM4P33991 AC004951.3-201ENST00000418645 1148 ntBASIC20.9■□□□□ 0.94
MCM4P33991 MCCD1P1-208ENST00000445732 328 ntBASIC20.9■□□□□ 0.94
MCM4P33991 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.9■□□□□ 0.94
MCM4P33991 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.9■□□□□ 0.94
MCM4P33991 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
MCM4P33991 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MCM4P33991 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
MCM4P33991 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MCM4P33991 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.9■□□□□ 0.94
MCM4P33991 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
MCM4P33991 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.89■□□□□ 0.94
MCM4P33991 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.89■□□□□ 0.94
MCM4P33991 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MCM4P33991 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
MCM4P33991 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
MCM4P33991 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
MCM4P33991 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.89■□□□□ 0.94
MCM4P33991 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.89■□□□□ 0.94
MCM4P33991 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MCM4P33991 FSCN1P1-201ENST00000568912 1481 ntBASIC20.89■□□□□ 0.94
MCM4P33991 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MCM4P33991 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
MCM4P33991 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 AC008040.2-201ENST00000461049 708 ntBASIC20.89■□□□□ 0.93
MCM4P33991 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.89■□□□□ 0.93
MCM4P33991 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.89■□□□□ 0.93
MCM4P33991 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.89■□□□□ 0.93
MCM4P33991 MIR6786-201ENST00000616843 113 ntBASIC20.89■□□□□ 0.93
MCM4P33991 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
MCM4P33991 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
MCM4P33991 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.89■□□□□ 0.93
MCM4P33991 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
MCM4P33991 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
MCM4P33991 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MCM4P33991 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.88■□□□□ 0.93
MCM4P33991 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.88■□□□□ 0.93
MCM4P33991 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MCM4P33991 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.88■□□□□ 0.93
MCM4P33991 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.88■□□□□ 0.93
MCM4P33991 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.88■□□□□ 0.93
MCM4P33991 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.88■□□□□ 0.93
MCM4P33991 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MCM4P33991 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 AC132938.6-201ENST00000623828 1655 ntBASIC20.88■□□□□ 0.93
MCM4P33991 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MCM4P33991 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 AC036111.1-201ENST00000533973 1582 ntBASIC20.88■□□□□ 0.93
MCM4P33991 REXO1L11P-201ENST00000620964 1927 ntBASIC20.88■□□□□ 0.93
MCM4P33991 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MCM4P33991 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
MCM4P33991 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MCM4P33991 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
MCM4P33991 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MCM4P33991 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms