Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.32■□□□□ 0.52
HOXC13P31276 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
HOXC13P31276 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC13P31276 IGHV3-22-201ENST00000520721 359 ntBASIC18.32■□□□□ 0.52
HOXC13P31276 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.32■□□□□ 0.52
HOXC13P31276 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.32■□□□□ 0.52
HOXC13P31276 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXC13P31276 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.32■□□□□ 0.52
HOXC13P31276 AL691403.2-201ENST00000618460 490 ntBASIC18.32■□□□□ 0.52
HOXC13P31276 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.32■□□□□ 0.52
HOXC13P31276 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
HOXC13P31276 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC13P31276 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.32■□□□□ 0.52
HOXC13P31276 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXC13P31276 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC13P31276 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HOXC13P31276 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HOXC13P31276 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HOXC13P31276 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HOXC13P31276 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HOXC13P31276 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.31■□□□□ 0.52
HOXC13P31276 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC13P31276 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.31■□□□□ 0.52
HOXC13P31276 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC13P31276 AC010460.3-201ENST00000511359 1579 ntBASIC18.31■□□□□ 0.52
HOXC13P31276 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC13P31276 HMGN1P19-201ENST00000436976 333 ntBASIC18.31■□□□□ 0.52
HOXC13P31276 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC13P31276 SCARNA2-201ENST00000458748 420 ntBASIC18.31■□□□□ 0.52
HOXC13P31276 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC13P31276 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC13P31276 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC13P31276 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC13P31276 AL356488.2-201ENST00000602755 427 ntBASIC18.31■□□□□ 0.52
HOXC13P31276 AC140113.2-201ENST00000604370 208 ntBASIC18.31■□□□□ 0.52
HOXC13P31276 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC13P31276 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HOXC13P31276 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HOXC13P31276 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HOXC13P31276 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
HOXC13P31276 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.31■□□□□ 0.52
HOXC13P31276 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC13P31276 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.31■□□□□ 0.52
HOXC13P31276 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HOXC13P31276 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.31■□□□□ 0.52
HOXC13P31276 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HOXC13P31276 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC13P31276 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC13P31276 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.3■□□□□ 0.52
HOXC13P31276 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.3■□□□□ 0.52
HOXC13P31276 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC13P31276 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.3■□□□□ 0.52
HOXC13P31276 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 AC007967.3-201ENST00000434308 558 ntBASIC18.3■□□□□ 0.52
HOXC13P31276 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.3■□□□□ 0.52
HOXC13P31276 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC13P31276 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.3■□□□□ 0.52
HOXC13P31276 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.3■□□□□ 0.52
HOXC13P31276 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC13P31276 AC010327.4-202ENST00000591484 748 ntBASIC18.3■□□□□ 0.52
HOXC13P31276 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC13P31276 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HOXC13P31276 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 AC012317.2-201ENST00000623305 2251 ntBASIC18.3■□□□□ 0.52
HOXC13P31276 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC13P31276 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HOXC13P31276 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC13P31276 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC13P31276 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC13P31276 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC13P31276 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC13P31276 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC13P31276 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC13P31276 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HOXC13P31276 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC13P31276 GNAS-203ENST00000306120 1878 ntBASIC18.29■□□□□ 0.52
HOXC13P31276 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.29■□□□□ 0.52
HOXC13P31276 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC13P31276 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.29■□□□□ 0.52
HOXC13P31276 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms