Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HOXC8P31273 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC8P31273 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HOXC8P31273 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HOXC8P31273 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC8P31273 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HOXC8P31273 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
HOXC8P31273 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXC8P31273 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
HOXC8P31273 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HOXC8P31273 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HOXC8P31273 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC8P31273 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.21■□□□□ 0.67
HOXC8P31273 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC8P31273 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 KRT19P2-202ENST00000557173 1012 ntBASIC19.21■□□□□ 0.67
HOXC8P31273 AL355385.1-201ENST00000606123 409 ntBASIC19.21■□□□□ 0.67
HOXC8P31273 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 ELL2P1-201ENST00000413990 1906 ntBASIC19.21■□□□□ 0.67
HOXC8P31273 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HOXC8P31273 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC8P31273 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC8P31273 AC090164.3-201ENST00000610780 2143 ntBASIC19.21■□□□□ 0.67
HOXC8P31273 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
HOXC8P31273 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC8P31273 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC8P31273 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC8P31273 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC8P31273 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC8P31273 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC8P31273 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC8P31273 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXC8P31273 REXO1L11P-201ENST00000620964 1927 ntBASIC19.2■□□□□ 0.66
HOXC8P31273 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HOXC8P31273 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXC8P31273 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.2■□□□□ 0.66
HOXC8P31273 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXC8P31273 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.2■□□□□ 0.66
HOXC8P31273 AC004877.2-201ENST00000623941 599 ntBASIC19.2■□□□□ 0.66
HOXC8P31273 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXC8P31273 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HOXC8P31273 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC8P31273 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
HOXC8P31273 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC8P31273 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC8P31273 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC8P31273 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HOXC8P31273 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC8P31273 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC8P31273 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXC8P31273 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC8P31273 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HOXC8P31273 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC8P31273 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXC8P31273 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.19■□□□□ 0.66
HOXC8P31273 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC8P31273 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC8P31273 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
HOXC8P31273 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC8P31273 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXC8P31273 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXC8P31273 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXC8P31273 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC8P31273 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXC8P31273 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC8P31273 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HOXC8P31273 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC8P31273 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC8P31273 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HOXC8P31273 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HOXC8P31273 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HOXC8P31273 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC8P31273 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC8P31273 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.18■□□□□ 0.66
HOXC8P31273 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC8P31273 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.18■□□□□ 0.66
HOXC8P31273 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms