Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCL1P22362 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL1P22362 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCL1P22362 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCL1P22362 AC012313.1-201ENST00000593393 3059 ntBASIC15.25■□□□□ 0.03
CCL1P22362 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL1P22362 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL1P22362 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCL1P22362 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 COX5BP2-201ENST00000392354 334 ntBASIC15.25■□□□□ 0.03
CCL1P22362 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.25■□□□□ 0.03
CCL1P22362 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL1P22362 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 VENTXP5-201ENST00000523979 775 ntBASIC15.25■□□□□ 0.03
CCL1P22362 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.25■□□□□ 0.03
CCL1P22362 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCL1P22362 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCL1P22362 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.25■□□□□ 0.03
CCL1P22362 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCL1P22362 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCL1P22362 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL1P22362 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL1P22362 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL1P22362 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCL1P22362 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CCL1P22362 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL1P22362 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL1P22362 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCL1P22362 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCL1P22362 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CCL1P22362 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL1P22362 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCL1P22362 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL1P22362 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CCL1P22362 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL1P22362 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.24■□□□□ 0.03
CCL1P22362 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL1P22362 RNF126P1-202ENST00000569893 925 ntBASIC15.24■□□□□ 0.03
CCL1P22362 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.24■□□□□ 0.03
CCL1P22362 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL1P22362 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL1P22362 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL1P22362 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL1P22362 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL1P22362 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL1P22362 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCL1P22362 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCL1P22362 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL1P22362 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL1P22362 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCL1P22362 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCL1P22362 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL1P22362 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL1P22362 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.23■□□□□ 0.03
CCL1P22362 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCL1P22362 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CCL1P22362 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms