Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
RAB5AP20339 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RAB5AP20339 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
RAB5AP20339 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB5AP20339 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RAB5AP20339 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RAB5AP20339 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.79□□□□□ -0.2
RAB5AP20339 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB5AP20339 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB5AP20339 MIR600HG-201ENST00000449175 5984 ntBASIC13.79□□□□□ -0.2
RAB5AP20339 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB5AP20339 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.79□□□□□ -0.2
RAB5AP20339 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB5AP20339 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.79□□□□□ -0.2
RAB5AP20339 MIR6084-201ENST00000622012 110 ntBASIC13.79□□□□□ -0.2
RAB5AP20339 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.79□□□□□ -0.2
RAB5AP20339 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB5AP20339 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB5AP20339 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB5AP20339 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB5AP20339 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB5AP20339 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.79□□□□□ -0.2
RAB5AP20339 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB5AP20339 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB5AP20339 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB5AP20339 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB5AP20339 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB5AP20339 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RAB5AP20339 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAB5AP20339 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB5AP20339 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB5AP20339 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.78□□□□□ -0.2
RAB5AP20339 AF213884.3-201ENST00000563833 479 ntBASIC13.78□□□□□ -0.2
RAB5AP20339 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.78□□□□□ -0.2
RAB5AP20339 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RAB5AP20339 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB5AP20339 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RAB5AP20339 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.78□□□□□ -0.2
RAB5AP20339 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB5AP20339 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RAB5AP20339 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB5AP20339 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms